Sardine (Sardinops sagax) from Southern Benguela DEB model code

Dynamic energy budget (DEB) model used to simulate the growth and reproduction of sardine (<i>Sardinops sagax</i>) in the Southern Benguela.<div><br></div><div>As Chapter 3 & 4 part of thesis presented in fulfilment of the degree of Doctor of Philosophy in the department of Biological Sciences, Faculty of Science, University of Cape Town, South Africa.<br><div><br></div><div>This folder includes all MATLAB scripts and parameter data used:</div><div>Chapter 3 experiments:</div><div><br></div><div>Main model script:</div><div>* Sardine.m</div><div>Visual Parameter estimation script:</div><div>* par_variant.m</div><div>Parameter scripts:</div><div>* Sparameter_calc.m</div><div>* Parameters_Sardine.m</div><div>* mydata_Sardinops_sagax.m</div><div>Startvalue script:</div><div>* Startvalue_Sardine.m</div><div><br></div><div>Functional response script (f):<br></div><div>* f_variant.m</div><div>Temperature script (T): </div><div>* Temp_variant</div><div>Starvation experiments<br></div><div>* Starts with: Starving</div><div><br></div><div>Chapter 4 experiments:</div><div>All start with Sardine_ followed by life stage larvae_ , recruit_ or adult_ and then experiment type:</div><div>Temperature alone = Temp</div><div>Feeding = food</div><div>Combined = fTemp_ followed by the which pair of conditions were used</div></div>