University of Cape Town
Introduction to Nextflow (6.78 MB)

Introduction to Nextflow Workshop 2020 Training Material Archive

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posted on 2022-03-04, 07:58 authored by Phelelani Thokozani Mpangase

This is an archive containing training materials for the H3ABioNet course: “Introduction to Nextflow Workshop 2020”.

Brief description of the course:

The use of workflow technologies such as Nextflow is becoming increasingly pervasive in bioinformatics. Workflows automate the execution of various bioinformatics tools and pipelines and reduces the time one spends on running the different steps in a particular pipeline while testing various parameters as well as enabling reproducible analysis. The “Introduction to Nextflow” workshop will provide an introduction to workflows, some basic usage and syntax for using Nextflow.

Course trainers/authors:

Phelelani Mpangase

Course sponsor/organisers:

Organisers: Phelelani Mpangase, Shaun Aron, Christopher Fields, Gerrit Botha, Suresh Maslamoney, Yasmina Jaufeerally Fakim, Shakuntala Baichoo, Itunuoluwa Isewon, Scott Hazelhurst, Sumir Panji, Nicky Mulder

Sponsors: Sydney Brenner Institute for Molecular Biology and H3ABioNet

Course level: Introductory

The archive contains the following items:

  • Trainer/creator file containing the names of the person/s responsible for organising and delivering the course

  • Course information file - which contains the original information about the course and includes a course schedule

  • Lecture materials which include lecture slides, tutorials and datasets

  • Copy of a Github repository

Funding information:

H3ABioNet is supported by the National Human Genome Research Institute of the National Institutes of Health under Award Number U24HG006941. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

This upload was performed by: Verena Ras | H3ABioNet Training and Outreach Coordinator


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