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Data description P078 rev01.txt (0.83 kB)
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E_and_F_vs_h_Varying_R_c.m (4.36 kB)
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E_and_F_vs_h_Varying_R_v_and_gp120.m (4.42 kB)
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E_and_F_vs_h_Varying_R_c_visco.m (8.38 kB)
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E_and_F_vs_h_Varying_R_v_and_gp120_visco.m (8.75 kB)
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Visco_vs_linear.m (6.46 kB)
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Linear- and visco-elastic model of forces and energies in virion-cell interactions during full engulfment in HIV: Impact of virion maturation and cell morphology

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posted on 2023-06-15, 07:20 authored by Elizabeth Kruse, Tamer Abdalrahman, Philippe Selhorst, Thomas FranzThomas Franz

MATLAB CODE


A) For the Linear-elastic Model - 2 files:

  • E_and_F_vs_h_Varying_R_c.m: Code that calculates the energy and force for various cell radius parameters
  • E_and_F_vs_h_Varying_R_v_and_gp120.m: Code that calculates the energy and force for various virion parameters


B) For the Viscoelastic Model - 2 files:

  • E_and_F_vs_h_Varying_R_c_visco.m: Code that calculates the energy and force for various cell radius parameters
  • E_and_F_vs_h_Varying_R_v_and_gp120_visco.m: Code that calculates the energy and force for various virion parameters


C) For comparison of linear-elastic and viscoelastic models - 1 file:

  • Visco_vs_linear.m: Compares the linear and viscoelastic model 

Funding

National Research Foundation of South Africa, grant UID92531 to TF

National Research Foundation of South Africa, grant UID93542 to TF

National Research Foundation of South Africa, Innovation Doctoral Scholarship to EK

South African Medical Research Council, grant SIR328148 to TF

University of Cape Town, Doctoral Research Scholarship and KW Johnston Bequest Scholarship to EK

History

Department/Unit

Biomedical Engineering Research Centre & Division of Biomedical Engineering Department of Human Biology Faculty of Health Sciences

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    Biomedical Engineering

    Categories

    Keywords

    ENDOCYTOSIShuman immunodeficiency virusvirionmechanics modelstiffness-gradient

    Licence

    CC BY 4.0

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