Linear- and visco-elastic model of forces and energies in virion-cell interactions during full engulfment in HIV: Impact of virion maturation and cell morphology
software
posted on 2023-06-15, 07:20 authored by Elizabeth Kruse, Tamer Abdalrahman, Philippe Selhorst, Thomas FranzThomas Franz<p>MATLAB CODE</p>
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<p>A) For the Linear-elastic Model - 2 files:</p>
<ul>
<li>E_and_F_vs_h_Varying_R_c.m: Code that calculates the energy and force for various cell radius parameters</li>
<li>E_and_F_vs_h_Varying_R_v_and_gp120.m: Code that calculates the energy and force for various virion parameters</li>
</ul>
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<p>B) For the Viscoelastic Model - 2 files:</p>
<ul>
<li>E_and_F_vs_h_Varying_R_c_visco.m: Code that calculates the energy and force for various cell radius parameters</li>
<li>E_and_F_vs_h_Varying_R_v_and_gp120_visco.m: Code that calculates the energy and force for various virion parameters</li>
</ul>
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<p>C) For comparison of linear-elastic and viscoelastic models - 1 file:</p>
<ul>
<li>Visco_vs_linear.m: Compares the linear and viscoelastic model </li>
</ul><p></p>
Funding
National Research Foundation of South Africa, grant UID92531 to TF
National Research Foundation of South Africa, grant UID93542 to TF
National Research Foundation of South Africa, Innovation Doctoral Scholarship to EK
South African Medical Research Council, grant SIR328148 to TF
University of Cape Town, Doctoral Research Scholarship and KW Johnston Bequest Scholarship to EK
History
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