This is an archive containing training materials for the H3ABioNet course: “Introduction to Bioinformatics Training (IBT) Course”.
Brief description of the course:
H3ABioNet‘s Introduction to Bioinformatics course (IBT) provides an introduction to the field of bioinformatics, with a focus on important bioinformatic tools and resources.
Over a period of 3 months of intensive biweekly contact sessions, the course combines theoretical and practical sessions to allow participants to gain practical experience in using various tools and resources. During contact sessions, classrooms meet virtually to discuss the session’s content with each other and the trainer.
Course trainers/authors:
Module 1: Databases and Resources
Shaun Aron | Affiliation: University of Witwatersrand, H3ABioNet
Nicola Mulder | Affiliation: University of Cape Town, H3ABioNet
Module 2: Linux
Amel Ghouila | Affiliation: Institut Pasteur de Tunis, H3ABioNet
Module 3: Sequence Alignment
Jonathan Kayondo | Affiliation: Uganda Virus Research Institute
Sonal Henson | Affiliation: International Centre of Insect Physiology and Ecology (ICIPE)
Module 4: Multiple Sequence Alignment
Ahmed Mansour Alzohairy | Affiliation: The Egyptian Center of Bioinformatics and Genomics, Zagazig University; H3ABioNet
Module 5: Genomics
Fatma Guerfali | Affiliation: Institut Pasteur de Tunis
Emily Perry | Affiliation: European Bioinformatics Institute (EMBL-EBI)
Module 6: Molecular Evolution and Phylogenetics
Anna Zhukova | Affiliation: Instut Pasteerur, France
Module 6 (2016): Protein Structure Bioinformatics
Ruben Cloete | Affiliation: South African National Bioinformatics Institute, University of the Western Cape
Rehab Ahmed | Affiliation: Centre for Bioinformatics, University of Khartoum (CBSB), H3ABioNet
Introduction Week
Verena Ras | | IBT course convenor | Affiliation: University of Cape Town, H3ABioNet
Wrap-up Week
Verena Ras | | IBT course convenor | Affiliation: University of Cape Town, H3ABioNet
Paballo Chauke | IBT course convenor | Affiliation: University of Cape Town, H3ABioNet
Shaun Aron | IBT core team | Affiliation: University of Witwatersrand, H3ABioNet
Guest Trainers
Pedro L. Fernandes | | Affiliation: Instituto Gulbenkian de Ciência
Introduction: ‘What is Bioinformatics and why is it important?’
David P. Judge | Affiliation: Freelance independent Bioinformatics instructor. Formerly, Bioinformatics Training Programme coordinator, University of Cambridge, Department of Genetics, Cambridge
Introduction: ‘What is Bioinformatics and why is it important?’
Staff Training
Paballo Chauke | IBT course convenor | Affiliation: University of Cape Town, H3ABioNet
Shaun Aron | IBT core team | Affiliation: University of Witwatersrand, H3ABioNet
Course sponsor/organisers:
IBT Core team
Verena Ras | Affiliation: University of Cape Town, H3ABioNet
Paballo Chauke | Affiliation: University of Cape Town, H3ABioNet
Shaun Aron | Affiliation: University of Witwatersrand, H3ABioNet
Nicola Mulder | Affiliation: University of Cape Town, H3ABioNet
Sumir Panji | Affiliation: University of Cape Town, H3ABioNet
Suresh Maslemoney | Affiliation: University of Cape Town, H3ABioNet
Course level: Introductory
Keywords: Genetics, Genomics. Nucleic acids analysis
The archive contains the following items:
Trainer/creator file containing the names of the person/s responsible for organising and delivering the course
Course information file - which contains the original information about the course and includes a course schedule
Lecture materials which include lecture slides, tutorials and datasets
Lecture videos with english subtitles
Funding information:
H3ABioNet is supported by the National Human Genome Research Institute of the National Institutes of Health under Award Number U24HG006941. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
This upload was performed by: Verena Ras | H3ABioNet Training and Outreach Coordinator
License: This course was created under a creative commons license thus materials are free for reuse, provided the original course author AND H3ABioNet are cited/credited as the original creators of the work.
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